Antibody Phage Display Technology for Sensor-Based Virus Detection: Current Status and Future Prospects.

Viruses are widespread in the environment, and many of them are major pathogens of serious plant, animal, and human diseases. The risk of pathogenicity, together with the capacity for constant mutation, emphasizes the need for measures to rapidly detect viruses. The need for highly sensitive bioanalytical methods to diagnose and monitor socially significant viral diseases has increased in the past few years. This is due, on the one hand, to the increased incidence of viral diseases in general (including the unprecedented spread of a new coronavirus infection, SARS-CoV-2), and, on the other hand, to the need to overcome the limitations of modern biomedical diagnostic methods. Phage display technology antibodies as nano-bio-engineered macromolecules can be used for sensor-based virus detection. This review analyzes the commonly used virus detection methods and approaches and shows the prospects for the use of antibodies prepared by phage display technology as sensing elements for sensor-based virus detection.

One-Shot Laser-Pulse Modification of Bare and Silica-Coated Gold Nanoparticles of Various Morphologies.

Gold nanoparticles are widely used in laser biomedical applications due to their favorable properties, mainly localized plasmon resonance. However, laser radiation can cause a change in the shape and size of plasmonic nanoparticles, thus resulting in an unwanted reduction of their photothermal and photodynamic efficiency due to a drastic alteration of optical properties. Most previously reported experiments were carried out with bulk colloids where different particles were irradiated by different numbers of laser pulses, thus making it difficult to accurately evaluate the laser power photomodification (PM) threshold. Here, we examine the one-shot nanosecond laser-pulse PM of bare and silica-coated gold nanoparticles moving in a capillary flow. Four types of gold nanoparticles, including nanostars, nanoantennas, nanorods, and SiO2@Au nanoshells, were fabricated for PM experiments. To evaluate the changes in the particle morphology under laser irradiation, we combine measurements of extinction spectra with electron microscopy. A quantitative spectral approach is developed to characterize the laser power PM threshold in terms of normalized extinction parameters. The experimentally determined PM threshold increases in series were as follows: nanorods, nanoantennas, nanoshells, and nanostars. An important observation is that even a thin silica shell significantly increases the photostability of gold nanorods. The developed methods and reported findings can be useful for the optimal design of plasmonic particles and laser irradiation parameters in various biomedical applications of functionalized hybrid nanostructures.

Albumin-Based Nanocarriers for the Simultaneous Delivery of Antioxidant Gene and Phytochemical to Combat Oxidative Stress.

Human serum albumin (HSA) nanoparticles are promising biocompatible, nontoxic, and non-immunogenic platforms for biomedical applications such as bioimaging and drug and gene delivery. The development of nonviral gene delivery vectors is a great challenge for efficient and safe gene therapy. Sulforaphane (SF) can stimulate the expression of antioxidant genes via activation of a nuclear transcription factor, the erythroid-2 related factor 2 (Nrf-2). Here, we use polyethyleneimine (PEI)-stabilized HSA nanoparticles to stimulate endogenous antioxidant defense mechanisms in lung epithelial cells L-132 through the combinatorial effect of SF drug and antioxidant superoxide dismutase 1 gene (pSOD1 plasmid) delivered by HSA-PEI-SF-pSOD1 nanocomposites (NCs). The developed NCs demonstrated high biocompatibility (L-132 viability, >95%, MTT assay) and high antioxidant activity because of efficient entry of the SOD1 gene and SF-loaded NCs at a very low (3 µg) dose in L-132 cells. A high transfection efficiency of L-132 cells (∼66%, fluorescent microscopy) was obtained with the GFP-tagged transgene SOD1-GFP. We speculate that the antioxidant activity of HSA-PEI-SF-pSOD1 NCs in L-132 cells is due to the initial release of SF followed by subsequent SOD1 gene expression after three to four days of incubation. Hence, the developed HSA-based NCs can be efficient biocompatible nanocarriers for safe and effective drug and gene delivery applications to treat diseases with high oxidative stress due to combinatorial SF and SOD1 gene mechanisms.

Photoemission of Plasmonic Gold Nanostars in Laser-Controlled Electron Current Devices for Technical and Biomedical Applications.

The main goal of this work was to modify the previously developed blade-type planar structure using plasmonic gold nanostars in order to stimulate photofield emission and provide efficient laser control of the electron current. Localization and enhancement of the field at the tips of gold nanostars provided a significant increase in the tunneling electron current in the experimental sample (both electrical field and photofield emission). Irradiation at a wavelength in the vicinity of the plasmon resonance (red laser) provided a gain in the photoresponse value of up to 5 times compared to irradiation far from the resonance (green laser). The prospects for transition to regimes of structure irradiation by femtosecond laser pulses at the wavelength of surface plasmon resonance, which lead to an increase in the local optical field, are discussed. The kinetics of the energy density of photoinduced hot and thermalized electrons is estimated. The proposed laser-controlled matrix current source is promising for use in X-ray computed tomography systems.

Multifunctional plasmonic gold nanostars for cancer diagnostic and therapeutic applications.

Gold nanostar (AuNSt) has gained great attention in bioimaging and cancer therapy due to their tunable surface plasmon resonance across the visible-near infrared range. Photothermal treatment and imaging capabilities including fluorescence lifetime imaging at two-photon excitation (TP-FLIM) and dark-field microscopic imaging are considered in this work. Two types of AuNSts having plasmon absorption peaks centred at 600 and 750 nm wavelength were synthesized and studied. Both NSts exhibited low cytotoxicity on A549 human lung carcinoma cells. A strong emission at two-photon excitation was observed for both NSts, well-distinguishable from lifetimes of bio-object autofluorescence. High efficiency in raising the temperature in the NSts environment with the irradiation of near infrared, AuNSts triggered photothermal effect. The decreased cell viability of A549 observed via MTT test and the cell membrane damaging was demonstrated with trypan blue staining. These results suggest AuNSts can be agents with tunable plasmonic properties for imaging and photothermal therapy.

Live Cell Poration by Au Nanostars to Probe Intracellular Molecular Composition with SERS.

A new type of flat substrate has been used to visualize structures inside living cells by surface-enhanced Raman scattering (SERS) and to study biochemical processes within cells. The SERS substrate is formed by stabilized aggregates of gold nanostars on a glass microscope slide coated with a layer of poly (4-vinyl pyridine) polymer. This type of SERS substrate provides good cell adhesion and viability. Au nanostars' long tips can penetrate the cell membrane, allowing it to receive the SERS signal from biomolecules inside a living cell. The proposed nanostructured surfaces were tested to study, label-free, the distribution of various biomolecules in cell compartments.

Correction: A novel concept of two-component dielectric function for gold nanostars: theoretical modelling and experimental verification.

Correction for 'A novel concept of two-component dielectric function for gold nanostars: theoretical modelling and experimental verification' by Nikolai G. Khlebtsov et al., Nanoscale, 2020, 12, 19963-19981, DOI: 10.1039/D0NR02531C.

A novel concept of two-component dielectric function for gold nanostars: theoretical modelling and experimental verification.

Rational design of AuNST morphology requires adequate computational models. The bulk dielectric function is not applicable to sharp nanostar spikes. We suggest a two-component dielectric function in which the nanostar core is treated as a bulk material, whereas the size-corrected dielectric function of the spikes is treated by a modified Coronado-Schatz model. In addition to the strong broadening of plasmonic peaks, the simulated absorption and scattering spectra show unusual properties, which are not observed with bulk dielectric functions. The effect of NIR water absorption on nanostar spectra is small, and the absorption peak demonstrates the expected small decrease in the absorbing media. Surprisingly, however, water absorption increases the scattering peak by 30%. For the common surfactant-free Vo-Dinh AuNSTs, we report, for the first time, very intense SWIR plasmonic peaks around 1900 nm, in addition to the common strong peak in the UV-vis-NIR band (here, at 1100 nm). For bilayers of AuNSTs in air, we recorded two similarly intense peaks near 800 and 1500 nm. To simulate the experimental extinction spectra of colloids and bilayers on glass in air, we develop a statistical model that includes the major fraction of typical Vo-Dinh AuNSTs and two minor fractions of sea urchins and particles with protrusions. In contrast to the general belief, we show that the common UV-vis-NIR plasmonic peak of surfactant-free AuNSTs is related to short spikes on a spherical core, whereas long spikes produce an intense SWIR plasmonic mode. Such a structural assignment of vis-NIR and SWIR peaks does not seem to have been reported previously for surfactant-free nanostars. With our model, we demonstrate good agreement between simulated and measured spectra of colloids and bilayers on glass in air.

Selenite reduction by the rhizobacterium Azospirillum brasilense, synthesis of extracellular selenium nanoparticles and their characterisation.

Microbial reduction of selenium oxyanions has attracted attention in recent years. In this study, an original and simple method for the synthesis of extracellular selenium nanoparticles (Se NPs) of relatively uniform size has been developed using strains Sp7 and Sp245 of the ubiquitous plant-growth promoting rhizobacterium Azospirillum brasilense, both capable of selenite (SeO32-) reduction. In addition, a reliable purification protocol for the recovery of the Se NPs has been perfected, which could be applied with minor modifications to cultures of other microbial species. Importantly, it was found that, by changing the conditions of bacterial reduction of selenite, extracellularly localised Se NPs can be obtained using bacteria which would otherwise produce intracellular Se NPs. In particular, bacterial cultures grown up to the end of the logarithmic growth phase, washed free of culture medium and then incubated with selenite, were used to obtain extracellular Se NPs. Their sizes depended on the initial selenite concentration (∼25-80 nm in diameter at 50-10 mM selenite, respectively). The Se NPs obtained were characterised by transmission electron microscopy (TEM), dynamic light scattering, as well as Raman and UV-vis spectroscopies. Their zeta potential was found to be negative (ca. minus 21-24 mV). Bacterial selenite reduction was also studied in the presence of the efflux pump inhibitor carbonyl cyanide m-chlorophenylhydrazone (CCCP). In this case, TEM indicated the formation only of intracellular selenium crystallites. The data show that the formation of extracellular Se NPs requires normal bacterial metabolic activity, while CCCP evidently blocks the membrane export of Se0 nuclei.

Gold nanoparticles as an adjuvant: Influence of size, shape, and technique of combination with CpG on antibody production.

Gold nanoparticles (GNPs) are advantageous as an adjuvant in the design of effective vaccines and in the preparation of high-affinity antibodies to haptens and complete antigens. Another method of activating immunocompetent cells with colloidal gold is to conjugate GNPs with CpG oligodeoxynucleotides (ODNs). We examined how the size and shape of GNPs and various combinations of GNPs and CpG ODNs 1826 affect the immune response. When animals were injected with a model antigen (BSA) coupled to gold nanospheres (diameters, 15 and 50nm), nanorods, nanoshells, and nanostars, the titers of the resultant antibodies differed substantially. The antibody titers decreased in the sequence GNPs-50nm>GNPs-15nm>nanoshells>nanostars>nanorods>native BSA. We conclude that 50 and 15nm gold nanospheres are the optimal antigen carrier and adjuvant for immunization. The highest titer of anti-BSA antibodies was detected in the blood serum of mice immunized simultaneously with BSA-GNP and CpG-GNP conjugates.

Rational Design of Ultrabright SERS Probes with Embedded Reporters for Bioimaging and Photothermal Therapy.

Plasmonic nanoparticles can be utilized as surface-enhanced Raman scattering (SERS) probes for bioimaging and as photothermal (PT) agents for cancer therapy. Typically, their SERS and PT efficiencies reach maximal values under the on-resonant condition, when the excitation wavelength overlaps the localized surface plasmon resonance (LSPR) wavelength preferably in the near-infrared (NIR) biological window. However, the photogenerated heat may inevitably disturb or even destroy biological samples during the imaging process. Herein, we develop ultrabright SERS probes composed of metallic Au@Ag core-shell rodlike nanomatryoshkas (RNMs) with embedded Raman reporters. By rationally controlling the Ag shell thickness, the LSPR of RNMs can be tuned from UV to NIR range, resulting in highly tunable SERS and PT properties. As bright NIR SERS imaging nanoprobes, RNMs with a thick Ag shell are designed for minimal PT damage to the biological targets under the off-resonance condition, as illustrated through monitoring the changes in mitochondrial membrane potential of cancer cells during SERS imaging procedure. By contrast, RNMs with a thin Ag shell are designed as multifunctional NIR theranostic probes that combine enhanced photothermal therapy capability, as exemplified by efficient PT killing of cancer cells, with reduced yet still efficient imaging properties at the on-resonance excitation.

Impact of albumin based approaches in nanomedicine: Imaging, targeting and drug delivery.

A major challenge in the field of nanomedicine is to transform laboratory innovations into commercially successful clinical products. In this campaign, a variety of nanoenabled approaches have been designed and investigated for their role in biomedical applications. The advantages associated with the unique structure of albumin imparts it with the ability to interact with variety of molecules, while the functional groups present on their surface provide base for large number of modifications making it as an ideal nanocarrier system. So far, a variety of albumin based nanoenabled approaches have been intensively exploited for effective diagnosis and personalized medicine, among them some have successfully completed their journey from lab bench to marketed products. This review focuses on the recent most promising advancement in the field of albumin based nanoenabled approaches for various biomedical applications and their potential use in cancer diagnosis and therapy.

Gold nanoisland films as reproducible SERS substrates for highly sensitive detection of fungicides.

A wet-chemical approach is used to fabricate centimeter-scale gold nanoisland films (NIFs) with tunable morphology of islands and with strong electromagnetic coupling between them. The approach consists in a uniform seeding of small gold nanoparticles on a glass or silicon substrate, followed by controllable growth of the seeds into small nanoislands. A special technique for TEM sampling was developed to follow the gradual formation of larger-sized isolated nanoparticles, nanoislands of sintered overgrown seeds, and a complete gold layer with nanoscale cracks. The electromagnetic field distribution inside the fabricated NIFs was calculated by FDTD simulations applied to actual TEM images of the fabricated samples rather than to artificial models commonly used. SERS measurements with 1,4-aminothiophenol (ATP) molecules demonstrated the analytical enhancement factor about of 10(7) and the fundamental enhancement factor about of 10(8) for optimized substrates. These values were at least 1 order of magnitude higher than that for self-assembled arrays of gold nanostars and silver nanocubes. SERS spectra of independent samples demonstrated good sample-to-sample reproducibility in terms of the relative standard deviation (RSD) of the main peaks less than 20%. Additionally, Raman maps with 1 µm increment in X-Y directions of NIFs (800 spectral spots) demonstrated good point-to-point repeatability in the intensity of the main Raman vibration modes (RSD varied from 5% to 15% for 50 randomly selected points). A real-life application of the fabricated SERS substrates is exemplified by the detection of the thiram fungicide in apple peels within the 5-250 ppb linear detection range. Specifically, the NIF-based SERS technology detected thiram on apple peel down to level of 5 ng/cm(2).

Large-scale high-quality 2D silica crystals: dip-drawing formation and decoration with gold nanorods and nanospheres for SERS analysis.

High-quality colloidal crystals (CCs) are important for use in photonic research and as templates for large-scale plasmonic SERS substrates. We investigated how variations in temperature, colloid concentration, and dip-drawing parameters (rate, incubation time, etc) affect the structure of 2D CCs formed by highly monodisperse silica nanoparticles (SiNPs) synthesized in an l-arginine solution and regrown by a modified Stöber method. The best quality 2D CCs were obtained with aqueous 12 wt% colloids at a temperature of 25 °C, an incubation time of 1 min, and a drawing rate of 50 mm min(-1). Assembling of gold nanorods (GNRs) on 2D CCs resulted in the formation of ring-like chains with a preferential tail-to-tail orientation along the hexagonal boundaries. To the best of our knowledge, this is the first time that such nanostructures have been prepared. Owing to the preferential tail-to-tail packing of GNRs, 2D SiNP CC + GNR substrates demonstrated an analytical SERS enhancement of about 8000, which was 10 to 15 times higher than that for self-assembled GNRs on a silicon wafer. In addition, the analytical SERS enhancement was almost 60 times lower after replacing the nanorods in 2D SiNP CC + GNR substrates with 25 nm gold nanospheres.

Extinction and extra-high depolarized light scattering spectra of gold nanorods with improved purity and dimension tunability: direct and inverse problems.

The experimental depolarized light scattering ratio IVH/IVV of plasmonic nanorods is strongly decreased by a co-polarized contribution from impurity particles inevitably presented in suspensions fabricated by common seed-mediated methods with a single surfactant [typically, hexadecyltrimethylammonium bromide (CTAB)]. We used a binary NaOL (sodium oleate) + CTAB surfactant method (Ye et al., Nano Lett., 2013, 13, 555) to dramatically decrease the percentage of impurity particles in suspensions of as-prepared and overgrown nanorods without any separation procedures. The as-prepared nanorods demonstrated a very high ratio of longitudinal to transversal plasmonic maxima (of about 7) and an unprecedented, extra-high depolarized light scattering ratio IVH/IVV (of about 60%). To the best of our knowledge, this is the first experimental demonstration of the depolarized light scattering ratio approaching the theoretical limit of 75%. The NaOL + CTAB growing solution was also used to increase the nanorod diameters and lengths by a controllable overgrowing process. Statistical TEM data for as-prepared and overgrown nanorods were used to solve a direct problem, i.e. for T-matrix simulation of the extinction and depolarized light scattering spectra. To solve an inverse problem, with the extinction peak wavelength and full width at half-maximum (FWHM) as the input parameters, we obtained calibration plots to quantify the aspect ratio distribution in terms of a simple two-parametric log-normal model. Simultaneous fitting of the T-matrix calculations of extinction and depolarized light scattering spectra to the experimental data enabled us to retrieve the aspect ratio distribution and the percentage of impurity particles, in excellent agreement with statistical estimations based on transmission electron microscopy images.

Overgrowth of gold nanorods by using a binary surfactant mixture.

Seed-mediated surfactant-assisted growth is widely used as the most effective method for gold nanorod (NR) synthesis. Using prepared nanorods as seeds for further overgrowth can increase the dimensional tunability of the final particles. However, overgrowth in usual cetyltrimethylammonium bromide (CTAB) surfactant solutions leads to poor control of the final particle shape and size. In this work, we report an improved strategy to demonstrate the controllable overgrowth of gold NRs in the binary surfactant mixture sodium oleate (NaOL) + CTAB. This approach overcomes the difficulty of growing NR suspensions with small amounts of impurities. By controlling the total amount of added NR seeds, it is possible to tune the average length, diameter, and plasmon resonances of overgrown particles in a wide range. Together with the original NaOL + CTAB method developed by Murray and co-workers ( Nano Lett. 2013 , 13 , 555 ), this overgrowth approach expands the dimensional and plasmonic tunability of the fabrication technology without any decrease in the monodispersity and purity of samples.

SERS substrates formed by gold nanorods deposited on colloidal silica films.

We describe a new approach to the fabrication of surface-enhanced Raman scattering (SERS) substrates using gold nanorod (GNR) nanopowders to prepare concentrated GNR sols, followed by their deposition on an opal-like photonic crystal (OPC) film formed on a silicon wafer. For comparative experiments, we also prepared GNR assemblies on plain silicon wafers. GNR-OPC substrates combine the increased specific surface, owing to the multilayer silicon nanosphere structure, and various spatial GNR configurations, including those with possible plasmonic hot spots. We demonstrate here the existence of the optimal OPC thickness and GNR deposition density for the maximal SERS effect. All other things being equal, the analytical integral SERS enhancement of the GNR-OPC substrates is higher than that of the thick, randomly oriented GNR assemblies on plain silicon wafers. Several ways to further optimize the strategy suggested are discussed.

Analytical and theranostic applications of gold nanoparticles and multifunctional nanocomposites.

Gold nanoparticles (GNPs) and GNP-based multifunctional nanocomposites are the subject of intensive studies and biomedical applications. This minireview summarizes our recent efforts in analytical and theranostic applications of engineered GNPs and nanocomposites by using plasmonic properties of GNPs and various optical techniques. Specifically, we consider analytical biosensing; visualization and bioimaging of bacterial, mammalian, and plant cells; photodynamic treatment of pathogenic bacteria; and photothermal therapy of xenografted tumors. In addition to recently published reports, we discuss new data on dot immunoassay diagnostics of mycobacteria, multiplexed immunoelectron microscopy analysis of Azospirillum brasilense, materno-embryonic transfer of GNPs in pregnant rats, and combined photodynamic and photothermal treatment of rat xenografted tumors with gold nanorods covered by a mesoporous silica shell doped with hematoporphyrin.

Enhanced photoinactivation of Staphylococcus aureus with nanocomposites containing plasmonic particles and hematoporphyrin.

We fabricated composite nanoparticles consisting of a plasmonic core (gold nanorods or gold-silver nanocages) and a hematoporphyrin-doped silica shell. The dual photodynamic and photothermal activities of such nanoparticles against Staphylococcus aureus 209 P were studied and compared with the activities of reference solutions (hematoporphyrin or silica-coated plasmonic nanoparticles). Bacteria were incubated with nanocomposites or with the reference solutions for 15 min, which was followed by CW light irradiation with a few exposures of 5 to 30 min. To stimulate the photodynamic and photothermal activities of the nanocomposites, we used LEDs (405 and 625 nm) and a NIR laser (808 nm), respectively. We observed enhanced inactivation of S. aureus 209 P by nanocomposites in comparison with the reference solutions. By using fluorescence microscopy and spectroscopy, we explain the enhanced antimicrobial effect of hematoporphyrin-doped nanocomposites by their selective accumulation in the vicinity of the bacteria.